by Da Wei Huang, Brad T Sherman, Qina Tan, Jack R Collins, W Gregory Alvord, Jean Roayaei, Robert Stephens, Michael W Baseler, H Clifford Lane, Richard a Lempicki
Abstract:
The DAVID Gene Functional Classification Tool http://david.abcc.ncifcrf.gov uses a novel agglomeration algorithm to condense a list of genes or associated biological terms into organized classes of related genes or biology, called biological modules. This organization is accomplished by mining the complex biological co-occurrences found in multiple sources of functional annotation. It is a powerful method to group functionally related genes and terms into a manageable number of biological modules for efficient interpretation of gene lists in a network context.
Reference:
The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists. (Da Wei Huang, Brad T Sherman, Qina Tan, Jack R Collins, W Gregory Alvord, Jean Roayaei, Robert Stephens, Michael W Baseler, H Clifford Lane, Richard a Lempicki), In Genome biology, volume 8, 2007.
Bibtex Entry:
@article{Huang2007,
abstract = {The DAVID Gene Functional Classification Tool http://david.abcc.ncifcrf.gov uses a novel agglomeration algorithm to condense a list of genes or associated biological terms into organized classes of related genes or biology, called biological modules. This organization is accomplished by mining the complex biological co-occurrences found in multiple sources of functional annotation. It is a powerful method to group functionally related genes and terms into a manageable number of biological modules for efficient interpretation of gene lists in a network context.},
author = {Huang, Da Wei and Sherman, Brad T and Tan, Qina and Collins, Jack R and Alvord, W Gregory and Roayaei, Jean and Stephens, Robert and Baseler, Michael W and Lane, H Clifford and Lempicki, Richard a},
doi = {10.1186/gb-2007-8-9-r183},
issn = {1465-6914},
journal = {Genome biology},
keywords = {Algorithms,Cluster Analysis,Computational Biology,Computational Biology: methods,Data Interpretation, Statistical,Databases, Genetic,Gene Expression Profiling,Genetic Techniques,Genomics,Humans,Models, Theoretical,Oligonucleotide Array Sequence Analysis,Pattern Recognition, Automated,SML-LIB-BIBLIO,Software,lang:ENG},
mendeley-tags = {SML-LIB-BIBLIO,lang:ENG},
month = jan,
number = {9},
pages = {R183},
pmid = {17784955},
title = {{The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists.}},
url = {http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=2375021\&tool=pmcentrez\&rendertype=abstract},
volume = {8},
year = {2007}
}