Class Summary |
Sim_groupwise_DAG_abstract |
Abstract class used to represent a semantic measure which can be applied
between two sets of concepts expressed in a Directed Acyclic Graph (DAG). |
Sim_groupwise_DAG_Ali_Deane |
Ali W, Deane CM. |
Sim_groupwise_DAG_GIC |
Pesquita C, Faria D, Bastos H: Evaluating gobased semantic similarity
measures. |
Sim_groupwise_DAG_Lee_2004 |
Lee HK, Hsu AK, Sajdak J, Qin J, Pavlidis P: Coexpression analysis of human
genes across many microarray data sets. |
Sim_groupwise_DAG_LP |
Gentleman R: Visualizing and distances using GO. |
Sim_groupwise_DAG_NTO |
Mistry M, Pavlidis P: Gene Ontology term overlap as a measure of gene
functional similarity. |
Sim_groupwise_DAG_NTO_MAX |
Adaptation of Mistry M, Pavlidis P: Gene Ontology term overlap as a measure
of gene functional similarity. |
Sim_groupwise_DAG_TO |
Mistry M, Pavlidis P: Gene Ontology term overlap as a measure of gene
functional similarity. |
Sim_groupwise_DAG_UI |
Gentleman R: Visualizing and distances using GO. |