Uses of Interface
slib.sml.sm.core.measures.Sim_Groupwise_Direct

Packages that use Sim_Groupwise_Direct
slib.sml.sm.core.measures.graph.framework.dag   
slib.sml.sm.core.measures.graph.groupwise.dag   
slib.sml.sm.core.measures.others.groupwise.direct   
slib.sml.sm.core.measures.others.groupwise.direct.vector   
 

Uses of Sim_Groupwise_Direct in slib.sml.sm.core.measures.graph.framework.dag
 

Classes in slib.sml.sm.core.measures.graph.framework.dag that implement Sim_Groupwise_Direct
 class Sim_Framework_DAG_Set_abstract
          Abstract class used to facilitate implementation of set based measures.
 class Sim_Framework_DAG_Set_Bader_2003
          Bader G, Hogue C: An automated method for finding molecular complexes in large protein interaction networks.
 class Sim_Framework_DAG_Set_Batet_2010
          Batet M, Sanchez D, Valls A: An ontology-based measure to compute semantic similarity in biomedicine.
 class Sim_Framework_DAG_Set_Braun_Blanquet_1932
          Braun-Blanquet J: Plant sociology: the study of plant communities.
 class Sim_Framework_DAG_Set_Dice_1945
          Dice LR: Measures of the Amount of Ecologic Association Between Species.
 class Sim_Framework_DAG_Set_Jaccard_1901
          Jaccard P: Distribution de la flore alpine dans le bassin des Dranses et dans quelques regions voisines.
 class Sim_Framework_DAG_Set_Knappe_2004
          Knappe R, Bulskov H, Andreasen T: Perspectives on ontology-based querying.
 class Sim_Framework_DAG_Set_Korbel_2002
          Korbel JO, Snel B, Huynen M a, Bork P: SHOT: a web server for the construction of genome phylogenies.
 class Sim_Framework_DAG_Set_Maryland_Bridge_2003
          Mirkin B, Koonin E: A top-down method for building genome classification trees with linear binary hierarchies.
 class Sim_Framework_DAG_Set_Ochiai_1957
          Ochiai A: Zoogeographic studies on the soleoid fishes found in Japan and its neighbouring regions.
 class Sim_Framework_DAG_Set_Simpson_1960
          Simpson GG: Notes on the measurement of faunal resemblance.
 class Sim_Framework_DAG_Set_Sokal_Sneath_1963
          Sokal RR, Sneath PHA: Principles of numerical taxonomy.
 class Sim_Framework_DAG_Set_Tversky_1977
          Tversky A: Features of similarity.
 

Uses of Sim_Groupwise_Direct in slib.sml.sm.core.measures.graph.groupwise.dag
 

Classes in slib.sml.sm.core.measures.graph.groupwise.dag that implement Sim_Groupwise_Direct
 class Sim_groupwise_DAG_abstract
          Abstract class used to represent a semantic measure which can be applied between two sets of concepts expressed in a Directed Acyclic Graph (DAG).
 class Sim_groupwise_DAG_Ali_Deane
          Ali W, Deane CM.
 class Sim_groupwise_DAG_GIC
          Pesquita C, Faria D, Bastos H: Evaluating gobased semantic similarity measures.
 class Sim_groupwise_DAG_Lee_2004
          Lee HK, Hsu AK, Sajdak J, Qin J, Pavlidis P: Coexpression analysis of human genes across many microarray data sets.
 class Sim_groupwise_DAG_LP
          Gentleman R: Visualizing and distances using GO.
 class Sim_groupwise_DAG_NTO
          Mistry M, Pavlidis P: Gene Ontology term overlap as a measure of gene functional similarity.
 class Sim_groupwise_DAG_NTO_MAX
          Adaptation of Mistry M, Pavlidis P: Gene Ontology term overlap as a measure of gene functional similarity.
 class Sim_groupwise_DAG_TO
          Mistry M, Pavlidis P: Gene Ontology term overlap as a measure of gene functional similarity.
 class Sim_groupwise_DAG_UI
          Gentleman R: Visualizing and distances using GO.
 

Uses of Sim_Groupwise_Direct in slib.sml.sm.core.measures.others.groupwise.direct
 

Classes in slib.sml.sm.core.measures.others.groupwise.direct that implement Sim_Groupwise_Direct
 class Sim_groupwise_Random
          Random measure (used for test)
 

Uses of Sim_Groupwise_Direct in slib.sml.sm.core.measures.others.groupwise.direct.vector
 

Classes in slib.sml.sm.core.measures.others.groupwise.direct.vector that implement Sim_Groupwise_Direct
 class VectorSpaceModel
           
 



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