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Uses of Sim_Pairwise in slib.sml.sm.core.measures.graph.framework.dag |
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Classes in slib.sml.sm.core.measures.graph.framework.dag that implement Sim_Pairwise | |
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class |
Sim_Framework_DAG_Set_abstract
Abstract class used to facilitate implementation of set based measures. |
class |
Sim_Framework_DAG_Set_Bader_2003
Bader G, Hogue C: An automated method for finding molecular complexes in large protein interaction networks. |
class |
Sim_Framework_DAG_Set_Batet_2010
Batet M, Sanchez D, Valls A: An ontology-based measure to compute semantic similarity in biomedicine. |
class |
Sim_Framework_DAG_Set_Braun_Blanquet_1932
Braun-Blanquet J: Plant sociology: the study of plant communities. |
class |
Sim_Framework_DAG_Set_Dice_1945
Dice LR: Measures of the Amount of Ecologic Association Between Species. |
class |
Sim_Framework_DAG_Set_Jaccard_1901
Jaccard P: Distribution de la flore alpine dans le bassin des Dranses et dans quelques regions voisines. |
class |
Sim_Framework_DAG_Set_Knappe_2004
Knappe R, Bulskov H, Andreasen T: Perspectives on ontology-based querying. |
class |
Sim_Framework_DAG_Set_Korbel_2002
Korbel JO, Snel B, Huynen M a, Bork P: SHOT: a web server for the construction of genome phylogenies. |
class |
Sim_Framework_DAG_Set_Maryland_Bridge_2003
Mirkin B, Koonin E: A top-down method for building genome classification trees with linear binary hierarchies. |
class |
Sim_Framework_DAG_Set_Ochiai_1957
Ochiai A: Zoogeographic studies on the soleoid fishes found in Japan and its neighbouring regions. |
class |
Sim_Framework_DAG_Set_Simpson_1960
Simpson GG: Notes on the measurement of faunal resemblance. |
class |
Sim_Framework_DAG_Set_Sokal_Sneath_1963
Sokal RR, Sneath PHA: Principles of numerical taxonomy. |
class |
Sim_Framework_DAG_Set_Tversky_1977
Tversky A: Features of similarity. |
Uses of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag |
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Subinterfaces of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag | |
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interface |
Sim_Pairwise_DAG
Interface of a semantic similarity measure which can be used to compute the semantic similarity of two classes/concepts structured in a Directed Acyclic Graph (DAG). |
Uses of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag.edge_based |
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Classes in slib.sml.sm.core.measures.graph.pairwise.dag.edge_based that implement Sim_Pairwise | |
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class |
Sim_DAG_edge_abstract
Class used to represent a Sim_Pairwise_DAG which relies on a
edge-based approach. |
class |
Sim_pairwise_DAG_edge_Kyogoku_basic_2011
Kyogoku R, Fujimoto R, Ozaki T, Ohkawa T: A method for supporting retrieval of articles on protein structure analysis considering users ’ intention. |
class |
Sim_pairwise_DAG_edge_Leacock_Chodorow_1998
Implementation of Leacock and Chodorow semantic similarity measure. |
class |
Sim_pairwise_DAG_edge_Pekar_Staab_2002
Pekar V, Staab S: Taxonomy learning: factoring the structure of a taxonomy into a semantic classification decision. |
class |
Sim_pairwise_DAG_edge_Rada_1989
Rada R, Mili H, Bicknell E, Blettner M: Development and application of a metric on semantic nets. |
class |
Sim_pairwise_DAG_edge_Rada_LCA_1989
Rada R, Mili H, Bicknell E, Blettner M: Development and application of a metric on semantic nets. |
class |
Sim_pairwise_DAG_edge_Stojanovic_2001
Stojanovic N, Alexander M, Staab S, Rudi S, York S: SEAL - A Framework for Developing SEmantic PortALs. |
class |
Sim_pairwise_DAG_edge_Wu_Palmer_1994
Wu Z, Palmer M: Verb semantics and lexical selection. |
Uses of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag.edge_based.experimental |
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Classes in slib.sml.sm.core.measures.graph.pairwise.dag.edge_based.experimental that implement Sim_Pairwise | |
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class |
Sim_pairwise_DAG_edge_Al_Mubaid_2006
Al-Mubaid H, Nguyen HA: A cluster-based approach for semantic similarity in the biomedical domain. |
class |
Sim_pairwise_DAG_edge_G_SESAME_2007
TODO Check approximation using depth of concepts |
class |
Sim_pairwise_DAG_edge_Resnik_1995
Faites au feeling par seb, verifier quelle est proche de celle de resnik |
class |
Sim_pairwise_DAG_edge_Slimani_2006
Slimani T, Boutheina BY, Mellouli K: A New Similarity Measure based on Edge Counting. |
Uses of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag.hybrid |
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Classes in slib.sml.sm.core.measures.graph.pairwise.dag.hybrid that implement Sim_Pairwise | |
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class |
Sim_DAG_hybrid_abstract
Class used to represent a semantic similarity measure which is based on a hybrid approach. |
class |
Sim_pairwise_DAG_hybrid_Wang_2007
Wang JZ, Du Z, Payattakool R, Yu PS, Chen C-F: A new method to measure the semantic similarity of GO terms. |
Uses of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag.hybrid.experimental |
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Classes in slib.sml.sm.core.measures.graph.pairwise.dag.hybrid.experimental that implement Sim_Pairwise | |
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class |
Sim_pairwise_DAG_edge_Li_2003
Li Y, Bandar ZA, McLean D: An approach for measuring semantic similarity between words using multiple information sources. |
class |
Sim_pairwise_DAG_hybrid_Ranwez_2006
Ranwez S, Ranwez V, Villerd J, Crampes M: Ontological Distance Measures for Information Visualisation on Conceptual Maps. |
Uses of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag.node_based |
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Subinterfaces of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag.node_based | |
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interface |
Sim_DAG_node_abstract
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Classes in slib.sml.sm.core.measures.graph.pairwise.dag.node_based that implement Sim_Pairwise | |
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class |
Sim_pairwise_DAG_node_GL
Gower and Legendre IC-based abstract expression. |
class |
Sim_pairwise_DAG_node_Jaccard_3W_IC
IC formulation of the Jaccard measure. |
class |
Sim_pairwise_DAG_node_Jaccard_IC
IC formulation of the Jaccard measure. |
class |
Sim_pairwise_DAG_node_Jiang_Conrath_1997
Jiang J, Conrath D: Semantic Similarity Based on Corpus Statistics and Lexical Taxonomy. |
class |
Sim_pairwise_DAG_node_Jiang_Conrath_1997_Norm
Jiang J, Conrath D: Semantic Similarity Based on Corpus Statistics and Lexical Taxonomy. |
class |
Sim_pairwise_DAG_node_Lin_1998
Lin D: An Information-Theoretic Definition of Similarity. |
class |
Sim_pairwise_DAG_node_Resnik_1995
Resnik P: Using Information Content to Evaluate Semantic Similarity in a Taxonomy. |
class |
Sim_pairwise_DAG_node_Schlicker_2006_SimRel
Schlicker, Andreas, et al. |
class |
Sim_pairwise_DAG_node_Sim_IC_2010
Effectively integrating information content and structural relationship to improve the GO-based similarity measure between proteins. |
class |
Sim_pairwise_DAG_node_Tversky_IC
IC formulation of Tversky Ratio Model |
Uses of Sim_Pairwise in slib.sml.sm.core.measures.graph.pairwise.dag.node_based.experimental |
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Classes in slib.sml.sm.core.measures.graph.pairwise.dag.node_based.experimental that implement Sim_Pairwise | |
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class |
Sim_pairwise_DAG_node_GL_GraSM
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class |
Sim_pairwise_DAG_node_Harispe_2013
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class |
Sim_pairwise_DAG_node_Lin_1998_GraSM
Lin D: An Information-Theoretic Definition of Similarity. |
class |
Sim_pairwise_DAG_node_Mazandu_2012
Implementation of the Universal similarity measure i.e. |
class |
Sim_pairwise_DAG_node_Resnik_1995_Ancestors
Resnik P: Using Information Content to Evaluate Semantic Similarity in a Taxonomy. |
class |
Sim_pairwise_DAG_node_Resnik_1995_Descendants
Resnik P: Using Information Content to Evaluate Semantic Similarity in a Taxonomy. |
class |
Sim_pairwise_DAG_node_Resnik_1995_GraSM
Resnik P: Using Information Content to Evaluate Semantic Similarity in a Taxonomy. |
class |
Sim_pairwise_DAG_node_Schlicker_3WJaccard_SimRel
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class |
Sim_pairwise_DAG_node_Schlicker_GL_SimRel
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class |
Sim_pairwise_DAG_node_Schlicker_Jaccard_SimRel
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class |
Sim_pairwise_DAG_node_Schlicker_Tversky_SimRel
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Uses of Sim_Pairwise in slib.sml.sm.core.measures.others.pairwise |
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Classes in slib.sml.sm.core.measures.others.pairwise that implement Sim_Pairwise | |
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class |
Sim_pairwise_Random
Random measure for tests |
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