slib.examples.sml.go
Class SMComputationGO_groupwise_million

java.lang.Object
  extended by slib.examples.sml.go.SMComputationGO_groupwise_million

public class SMComputationGO_groupwise_million
extends Object

Example of a Semantic measure computation using the Semantic Measures Library. In this snippet we estimate the similarity of two genes annotated by concepts (terms) defined in the Gene Ontology. The Gene Ontology is expressed in OBO format. The similarity is estimated using an indirect groupwise measure based on: Lin's pairwise measure, Best Match Average aggregation strategy. More information at http://www.semantic-measures-library.org/ Note that you can set the LOG level in specified in log4j.xml, e.g. in root element, change value="INFO" to value="DEBUG"

Author:
Harispe Sébastien

Constructor Summary
SMComputationGO_groupwise_million()
           
 
Method Summary
static void main(String[] params)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

SMComputationGO_groupwise_million

public SMComputationGO_groupwise_million()
Method Detail

main

public static void main(String[] params)
                 throws slib.utils.ex.SLIB_Exception
Throws:
slib.utils.ex.SLIB_Exception


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