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A
add(String, URI)
- Method in class slib.indexer.wordnet.
IndexerWordNetBasic
add(String, Collection<URI>)
- Method in class slib.indexer.wordnet.
IndexerWordNetBasic
addDescription(URI, URIDescription)
- Method in class slib.indexer.
IndexHash
Associate a description to the given URI
addDescription(String)
- Method in interface slib.indexer.
URIDescription
Add a description
addDescription(String)
- Method in class slib.indexer.
URIDescriptionBasic
addDescriptions(Collection<String>)
- Method in interface slib.indexer.
URIDescription
Add a collection of descriptions
addDescriptions(String[])
- Method in interface slib.indexer.
URIDescription
Add an array of descriptions
addDescriptions(Collection<String>)
- Method in class slib.indexer.
URIDescriptionBasic
addDescriptions(String[])
- Method in class slib.indexer.
URIDescriptionBasic
addTreeNumber(String)
- Method in class slib.indexer.mesh.
MeshConcept
B
buildIndex(URIFactory, String, String)
- Static method in class slib.indexer.mesh.
Indexer_MESH_XML
Build an index for the descriptors specified in the MeSH XML.
buildIndex(URIFactory, String, String)
- Static method in class slib.indexer.obo.
IndexerOBO
Build an index for the terms specified in an OBO ontology.
buildIndex(URIFactory, G, String, String, boolean)
- Static method in class slib.indexer.snomed_ct.
IndexerSNOMEDCT_RF2
Only load an index for the URI already loaded
buildIndex(URIFactory, String, String, G, boolean)
- Static method in class slib.indexer.snomed_ct.
IndexerSNOMEDCT_RF2
Same as builIndex removing the index not associated to a loaded vertex
C
characters(char[], int, int)
- Method in class slib.indexer.mesh.
MeshXMLHandler
concept
- Variable in class slib.indexer.mesh.
MeshXMLHandler
containsDescriptionFor(URI)
- Method in class slib.indexer.
IndexHash
Return true if the given URI is associated to a description.
E
endElement(String, String, String)
- Method in class slib.indexer.mesh.
MeshXMLHandler
G
get(String)
- Method in class slib.indexer.wordnet.
IndexerWordNetBasic
getAssociatedURI()
- Method in interface slib.indexer.
URIDescription
getAssociatedURI()
- Method in class slib.indexer.
URIDescriptionBasic
getDescription(URI)
- Method in class slib.indexer.
IndexHash
Access to the description associated to a specific URI
getDescriptions()
- Method in interface slib.indexer.
URIDescription
Access to the descriptions associated to the object
getDescriptions()
- Method in class slib.indexer.
URIDescriptionBasic
getDescriptorName()
- Method in class slib.indexer.mesh.
MeshConcept
getDescriptorUI()
- Method in class slib.indexer.mesh.
MeshConcept
getIndex()
- Method in class slib.indexer.wordnet.
IndexerWordNetBasic
getMapping()
- Method in class slib.indexer.
IndexHash
Access to the Map which stores the description of each resource.
getPreferredDescription()
- Method in interface slib.indexer.
URIDescription
Access to the preferred description of the resource.
getPreferredDescription()
- Method in class slib.indexer.
URIDescriptionBasic
I
Indexer_MESH_XML
- Class in
slib.indexer.mesh
Class used to build an index for the descriptors specified in the MeSH XML.
Indexer_MESH_XML()
- Constructor for class slib.indexer.mesh.
Indexer_MESH_XML
IndexerOBO
- Class in
slib.indexer.obo
Class used to build an index for the terms specified in an OBO ontology
IndexerOBO()
- Constructor for class slib.indexer.obo.
IndexerOBO
IndexerSNOMEDCT_RF2
- Class in
slib.indexer.snomed_ct
IndexerSNOMEDCT_RF2()
- Constructor for class slib.indexer.snomed_ct.
IndexerSNOMEDCT_RF2
IndexerWordNetBasic
- Class in
slib.indexer.wordnet
DUMMY INDEXER USED TO DEBUG.
IndexerWordNetBasic()
- Constructor for class slib.indexer.wordnet.
IndexerWordNetBasic
IndexerWordNetBasic(URIFactory, G, String)
- Constructor for class slib.indexer.wordnet.
IndexerWordNetBasic
IndexHash
- Class in
slib.indexer
Class used to associate an URI to an object which contains its descriptions as String values.
IndexHash()
- Constructor for class slib.indexer.
IndexHash
M
MeshConcept
- Class in
slib.indexer.mesh
Simple representation of a Mesh Concept
MeshConcept()
- Constructor for class slib.indexer.mesh.
MeshConcept
MeshXMLHandler
- Class in
slib.indexer.mesh
MeshXMLHandler(Set<MeshConcept>)
- Constructor for class slib.indexer.mesh.
MeshXMLHandler
R
removeDescription(String)
- Method in interface slib.indexer.
URIDescription
Remove a description.
removeDescription(String)
- Method in class slib.indexer.
URIDescriptionBasic
removeDescriptions(Collection<String>)
- Method in interface slib.indexer.
URIDescription
Remove a collection of descriptions.
removeDescriptions(Collection<String>)
- Method in class slib.indexer.
URIDescriptionBasic
S
setDescriptorName(String)
- Method in class slib.indexer.mesh.
MeshConcept
setDescriptorUI(String)
- Method in class slib.indexer.mesh.
MeshConcept
setPreferredDescription(String)
- Method in interface slib.indexer.
URIDescription
Set the preferred description of the resource.
setPreferredDescription(String)
- Method in class slib.indexer.
URIDescriptionBasic
slib.indexer
- package slib.indexer
slib.indexer.mesh
- package slib.indexer.mesh
slib.indexer.obo
- package slib.indexer.obo
slib.indexer.snomed_ct
- package slib.indexer.snomed_ct
slib.indexer.wordnet
- package slib.indexer.wordnet
startElement(String, String, String, Attributes)
- Method in class slib.indexer.mesh.
MeshXMLHandler
T
toString()
- Method in class slib.indexer.mesh.
MeshConcept
U
URIDescription
- Interface in
slib.indexer
Interface which defines a simple way to store String values associated to a resource which is identified by an URI.
URIDescriptionBasic
- Class in
slib.indexer
In-memory implementation of the interface URIDescription
URIDescriptionBasic(URI)
- Constructor for class slib.indexer.
URIDescriptionBasic
Create a description for the given URI
URIDescriptionBasic(URI, String)
- Constructor for class slib.indexer.
URIDescriptionBasic
Create a description for the given URI with the given description as preferred description.
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